Examples & Tutorials¶
Learn how to use qpx through practical examples and real-world use cases.
Available Examples¶
Quick Start Examples¶
Basic examples for getting started with qpx:
- Convert MaxQuant Data
- Convert DIA-NN Data
- Absolute Expression Analysis
Workflow Examples¶
Complete workflows for different analysis scenarios:
- Label-Free Quantification (LFQ) Workflow
- Differential Expression Analysis
- End-to-end processing pipelines
Integration Examples¶
Integration with other tools and frameworks:
- Nextflow Pipeline Integration
- Python API Usage
- Automation scripts
Quality Control Examples¶
Generate comprehensive QC reports:
- Statistics generation
- QC visualizations
- HTML report creation
Need more examples? Check the tests/examples/ directory in the repository for real data files you can use for testing.